ZIDAS napari intro 09/21

This workshop will take you through the basics of bioimage analysis in Python and napari. We will be performing some analysis on segmented nuclei using a combination of napari, scikit-image, scipy, and cellpose.

Instructors

The instructor for this session is Kevin Yamauchi (@ky396)

Goals

The aim of this workshop is to provide an introduction to bioimage analysis in Python and napari. By the end of the workshop you should be able to

• use napari as an image viewer

• perform interactive analysis with napari in a jupyter notebook

• make use of the napari plugin ecosystem